Trial concept calculated: Applies function dbFindIdsUniqueTrials() with its defaults.
Arguments
- df
data frame such as from dbGetFieldsIntoDf. If `NULL`, prints fields needed in `df` for calculating this trial concept, which can be used with dbGetFieldsIntoDf.
Examples
# fields needed
f.isUniqueTrial()
#> [1] "ctrname"
# apply trial concept when creating data frame
dbc <- nodbi::src_sqlite(
dbname = system.file("extdata", "demo.sqlite", package = "ctrdata"),
collection = "my_trials", flags = RSQLite::SQLITE_RO)
trialsDf <- dbGetFieldsIntoDf(
calculate = "f.isUniqueTrial",
con = dbc)
#> Querying database (1 fields)...
#> Searching for duplicate trials...
#> - Getting all trial identifiers...
#> , 31 found in collection
#> - Finding duplicates among registers' and sponsor ids...
#> - 2 EUCTR _id were not preferred EU Member State record for 11 trials
#> - Keeping 5 / 3 / 8 / 8 / 5 records from CTGOV2 / EUCTR / CTGOV / ISRCTN / CTIS
#> = Returning keys (_id) of 29 records in collection "my_trials"
trialsDf
#> # A tibble: 31 × 2
#> `_id` .isUniqueTrial
#> <chr> <lgl>
#> 1 12949496 TRUE
#> 2 13281214 TRUE
#> 3 17473621 TRUE
#> 4 2012-003632-23-CZ FALSE
#> 5 2012-003632-23-SE TRUE
#> 6 2014-002606-20-PT TRUE
#> 7 2014-003556-31-GB FALSE
#> 8 2014-003556-31-SE TRUE
#> 9 2022-500244-37-00 TRUE
#> 10 2022-501142-30-00 TRUE
#> # ℹ 21 more rows